Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P55250 624.9316 625.9393 —
P55251 283.2792 284.2855 —
P55252 N1,N5,N10-Tricaffeoyl spermidine 631.2498 632.2512 —
P55253 608.9013 609.9125 —
P55258 608.9253 609.9268 —
P55259 608.6906 609.6976 —
P55260 624.9479 625.9558 —
P55262 6-Ketomyristic acid 242.1902 243.1973 —
P55265 Morellic acid 560.2383 561.2470 —
P55271 541.2613 542.2687 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G162000 hypothetical protein NA 0
Glyma.20G162100 hypothetical protein AT5G52510:SCL8:SCARECROW-like 8 0
Glyma.20G162200 hypothetical protein NA 0
Glyma.20G162300 hypothetical protein AT5G24010:AT5G24010:Protein kinase superfamily protein 0
Glyma.20G162400 hypothetical protein AT3G49645:AT3G49645:FAD-binding protein 0
Glyma.20G162500 hypothetical protein NA 0
Glyma.20G162700 hypothetical protein NA 0
Glyma.20G162800 hypothetical protein AT5G52660:AT5G52660:Homeodomain-like superfamily protein 0
Glyma.20G162900 hypothetical protein NA 0
Glyma.20G163000 hypothetical protein NA 0