Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P55367 157.9660 158.9738 —
P55373 625.1241 626.1300 —
P55374 Pyridomacrolidin 581.2199 582.2304 —
P55377 607.8877 608.8918 —
P55379 Pre-alcaligin 422.2002 423.2039 —
P55381 Hydroxynybomycin 314.0896 315.0962 —
P55383 Apigenin 7-(2''-acetyl-6''-methylglucuronide) 502.1080 503.1150 —
P55387 257.9007 258.9083 —
P55389 (4R)-4-Hydroxyipecoside 581.2079 582.2145 —
P55390 Withaperuvin H 578.2554 579.2585 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G161000 hypothetical protein AT4G25610:AT4G25610:C2H2-like zinc finger protein 0
Glyma.20G161100 hypothetical protein AT5G52420:PRCE3: 0
Glyma.20G161200 hypothetical protein NA 0
Glyma.20G161300 hypothetical protein NA 0
Glyma.20G161400 hypothetical protein NA 0
Glyma.20G161500 hypothetical protein NA 0
Glyma.20G161600 hypothetical protein AT5G15750:AT5G15750:Alpha-L RNA-binding motif/Ribosomal protein S4 family protein 0
Glyma.20G161700 hypothetical protein AT5G52440:HCF106:Bacterial sec-independent translocation protein mttA/Hcf106 0
Glyma.20G161800 hypothetical protein AT4G09980:EMB1691:Methyltransferase MT-A70 family protein 0
Glyma.20G161900 hypothetical protein NA 0