Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P12304 Amrubicin 483.1476 484.1512 176
P17789 Kaempferol 3-neohesperidoside-7-(6''-malonylglucoside) 872.2263 873.2325 176
P20561 669.1601 670.1662 176
P29540 Kadsuphilol L 606.2044 607.2073 176
P29563 Sulfocostunolide A 312.1036 313.1116 176
P29935 Acantrifoside A 942.5143 943.5248 176
P36283 Isopropyl dodecylfluorophosphonate 294.2113 295.2185 176
P38088 365.6483 366.6561 176
P00499 1-Pentanesulfonic acid 152.0504 153.0569 175
P32791 Tenuecyclamide A 460.0996 461.1056 175

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G161000 hypothetical protein AT4G25610:AT4G25610:C2H2-like zinc finger protein 0
Glyma.20G161100 hypothetical protein AT5G52420:PRCE3: 0
Glyma.20G161200 hypothetical protein NA 0
Glyma.20G161300 hypothetical protein NA 0
Glyma.20G161400 hypothetical protein NA 0
Glyma.20G161500 hypothetical protein NA 0
Glyma.20G161600 hypothetical protein AT5G15750:AT5G15750:Alpha-L RNA-binding motif/Ribosomal protein S4 family protein 0
Glyma.20G161700 hypothetical protein AT5G52440:HCF106:Bacterial sec-independent translocation protein mttA/Hcf106 0
Glyma.20G161800 hypothetical protein AT4G09980:EMB1691:Methyltransferase MT-A70 family protein 0
Glyma.20G161900 hypothetical protein NA 0