Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P30783 CDP-DG(18:1(12Z)-2OH(9,10)/a-17:0) 1025.5353 1026.5433 159
P49619 Rapisterone 508.3340 509.3432 159
P54107 N-(Sulfonatooxy)prop-2-enimidothioate 196.9815 197.9888 159
P00722 142.1090 143.1161 158
P02515 2,5-Dimethyl-3-furanthiol acetate 170.0374 171.0455 158
P05070 Flunoxaprofen 285.0822 286.0878 158
P08637 Melrosin A 476.1729 477.1829 158
P09407 Fura-2 641.1573 642.1634 158
P09940 Serdexmethylphenidate 499.1991 500.2024 158
P10501 Cyamemazine 323.1472 324.1527 158

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G160000 hypothetical protein NA 0
Glyma.20G160100 hypothetical protein AT4G33410:SPPL1:SIGNAL PEPTIDE PEPTIDASE-LIKE 1 0
Glyma.20G160200 hypothetical protein AT4G24020:NLP7:NIN like protein 7 0
Glyma.20G160300 hypothetical protein AT5G23890:AT5G23890:GPI-anchored adhesin-like protein 0
Glyma.20G160400 hypothetical protein AT2G37600:AT2G37600:Ribosomal protein L36e family protein__AT3G53740:AT3G53740:Ribosomal protein L36e family protein 0
Glyma.20G160500 hypothetical protein AT3G53740:AT3G53740:Ribosomal protein L36e family protein 0
Glyma.20G160600 Histone-lysine N-methyltransferase SUVR3 AT3G03750:SDG20:SET domain protein 20 0
Glyma.20G160700 hypothetical protein NA 0
Glyma.20G160800 hypothetical protein AT3G49055:AT3G49055:ATP-binding protein 0
Glyma.20G160900 hypothetical protein AT3G49060:AT3G49060:U-box domain-containing protein kinase family protein 0