Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P02197 Ponticaepoxide 182.0745 183.0824 173
P09241 683.2025 684.2094 173
P12520 L-Leucine-p-nitroanilide 251.1255 252.1347 173
P16284 511.7656 512.7723 173
P20181 (2-Naphthyl)methanol 158.0725 159.0790 173
P22382 Diphenylcarbazide 242.1167 243.1217 173
P26425 Cinnacassiol 842.3264 843.3399 173
P29775 Galangin 5-methyl ether 284.0665 285.0738 173
P36562 Phthalsaurediethylhexylester 306.1814 613.3688 173
P38062 2,2'-Dinor-beta,beta-carotene-3,4,3',4'-tetrone 564.3207 565.3290 173

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G160000 hypothetical protein NA 0
Glyma.20G160100 hypothetical protein AT4G33410:SPPL1:SIGNAL PEPTIDE PEPTIDASE-LIKE 1 0
Glyma.20G160200 hypothetical protein AT4G24020:NLP7:NIN like protein 7 0
Glyma.20G160300 hypothetical protein AT5G23890:AT5G23890:GPI-anchored adhesin-like protein 0
Glyma.20G160400 hypothetical protein AT2G37600:AT2G37600:Ribosomal protein L36e family protein__AT3G53740:AT3G53740:Ribosomal protein L36e family protein 0
Glyma.20G160500 hypothetical protein AT3G53740:AT3G53740:Ribosomal protein L36e family protein 0
Glyma.20G160600 Histone-lysine N-methyltransferase SUVR3 AT3G03750:SDG20:SET domain protein 20 0
Glyma.20G160700 hypothetical protein NA 0
Glyma.20G160800 hypothetical protein AT3G49055:AT3G49055:ATP-binding protein 0
Glyma.20G160900 hypothetical protein AT3G49060:AT3G49060:U-box domain-containing protein kinase family protein 0