Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P04657 Isopongaflavone 334.1227 335.1294 188
P06843 Leptanthin 286.0773 287.0845 188
P11295 3,5-Dihydroxyphenyl 1-O-(6-O-galloyl-beta-D-glucopyranoside) 440.0962 441.1006 188
P21336 Quercetin 3-(6''-ethylglucuronide) 506.1066 507.1119 188
P29799 Chaetoxanthone C 390.0909 391.0987 188
P31693 589.2530 590.2594 188
P33310 Ternatin C5 874.1936 875.2042 188
P46593 Chrotacumine B 387.1647 388.1710 188
P47225 Planktocyclin 800.4334 801.4318 188
P04106 N-Trifluoroacetyladriamycinol 641.1784 642.1889 187

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G160000 hypothetical protein NA 0
Glyma.20G160100 hypothetical protein AT4G33410:SPPL1:SIGNAL PEPTIDE PEPTIDASE-LIKE 1 0
Glyma.20G160200 hypothetical protein AT4G24020:NLP7:NIN like protein 7 0
Glyma.20G160300 hypothetical protein AT5G23890:AT5G23890:GPI-anchored adhesin-like protein 0
Glyma.20G160400 hypothetical protein AT2G37600:AT2G37600:Ribosomal protein L36e family protein__AT3G53740:AT3G53740:Ribosomal protein L36e family protein 0
Glyma.20G160500 hypothetical protein AT3G53740:AT3G53740:Ribosomal protein L36e family protein 0
Glyma.20G160600 Histone-lysine N-methyltransferase SUVR3 AT3G03750:SDG20:SET domain protein 20 0
Glyma.20G160700 hypothetical protein NA 0
Glyma.20G160800 hypothetical protein AT3G49055:AT3G49055:ATP-binding protein 0
Glyma.20G160900 hypothetical protein AT3G49060:AT3G49060:U-box domain-containing protein kinase family protein 0