Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P41917 TMC 2A 570.2358 571.2433 228
P06434 Eupaglehnin F 400.1272 401.1362 227
P11873 9R-hydroxy-2E,4E-decadienoic acid 184.1090 185.1162 227
P37633 1-(1,3-Benzothiazol-2-yl)-1-(2,4-dimethylphenyl)ethanol 283.1071 284.1131 227
P55372 Pentaethylene glycol 238.1414 239.1497 227
P01910 284.5701 285.5766 226
P33196 10-Deacetyltaxol-7-xyloside 943.3493 944.3610 225
P51321 Aspernigrin B 456.1702 457.1741 225
P09334 1-(Pentafluorophenyl)propane 210.0481 211.0553 224
P10043 547.5963 548.6029 224

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G160000 hypothetical protein NA 0
Glyma.20G160100 hypothetical protein AT4G33410:SPPL1:SIGNAL PEPTIDE PEPTIDASE-LIKE 1 0
Glyma.20G160200 hypothetical protein AT4G24020:NLP7:NIN like protein 7 0
Glyma.20G160300 hypothetical protein AT5G23890:AT5G23890:GPI-anchored adhesin-like protein 0
Glyma.20G160400 hypothetical protein AT2G37600:AT2G37600:Ribosomal protein L36e family protein__AT3G53740:AT3G53740:Ribosomal protein L36e family protein 0
Glyma.20G160500 hypothetical protein AT3G53740:AT3G53740:Ribosomal protein L36e family protein 0
Glyma.20G160600 Histone-lysine N-methyltransferase SUVR3 AT3G03750:SDG20:SET domain protein 20 0
Glyma.20G160700 hypothetical protein NA 0
Glyma.20G160800 hypothetical protein AT3G49055:AT3G49055:ATP-binding protein 0
Glyma.20G160900 hypothetical protein AT3G49060:AT3G49060:U-box domain-containing protein kinase family protein 0