Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P55273 Cistanoside D 652.2406 653.2558 —
P55274 Clobenzorex 259.1142 260.1207 —
P55275 609.7594 610.7622 —
P55277 Tiegusanin I 570.2441 571.2512 —
P55281 607.8298 608.8337 —
P55282 Difluprednate 508.2267 509.2321 —
P55283 Aerobactin 564.2307 565.2395 —
P55284 Boletocrocin B 499.2284 500.2320 —
P55285 Nicotaxine 555.2530 556.2628 —
P55289 608.8615 609.8654 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G159000 hypothetical protein NA 0
Glyma.20G159100 hypothetical protein AT5G52380:AT5G52380:VASCULAR-RELATED NAC-DOMAIN 6 0
Glyma.20G159200 hypothetical protein NA 0
Glyma.20G159300 hypothetical protein AT3G48990:AAE3:AMP-dependent synthetase and ligase family protein 0
Glyma.20G159400 hypothetical protein AT5G52390:AT5G52390:PAR1 protein 0
Glyma.20G159500 hypothetical protein AT3G49000:AT3G49000:RNA polymerase III subunit RPC82 family protein 0
Glyma.20G159600 hypothetical protein AT5G52400:CYP715A1:cytochrome P450, family 715, subfamily A, polypeptide 1 0
Glyma.20G159700 hypothetical protein AT5G52400:CYP715A1:cytochrome P450, family 715, subfamily A, polypeptide 1 0
Glyma.20G159800 hypothetical protein NA 0
Glyma.20G159900 hypothetical protein AT5G23870:AT5G23870:Pectinacetylesterase family protein 0