Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Open full metabolite explorer

Metabolite ID	Candidate annotation	Deionized mass (Da)	Average m/z	Associated genes (overlap)
P41898		546.7256	547.7355	141
P45366	Dechlorobarbamide	426.0934	427.1001	141
P48034	Halaminol B	199.1920	200.1999	141
P48323	1-Oleoylglycerophosphocholine	521.3420	522.3497	141
P54222		671.1509	672.1589	141
P05856	Midodrine	254.1227	255.1311	140
P07220	Polyanethole-sulfate	228.0448	229.0527	140
P07629		741.0583	742.0664	140
P10273	5-Imino-2-methyl-1-cyclopenten-1-ol	111.0682	112.0755	140
P20165	(+)-Cheimonophyllal	282.1437	283.1503	140

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Open full gene explorer

Gene ID	Description	Arabidopsis ortholog
Glyma.20G157500	hypothetical protein	AT3G48880:AT3G48880:RNI-like superfamily protein
Glyma.20G157600	hypothetical protein	AT4G25540:MSH3:homolog of DNA mismatch repair protein MSH3
Glyma.20G157800	hypothetical protein	AT4G25550:AT4G25550:Cleavage/polyadenylation specificity factor, 25kDa subunit
Glyma.20G157900	hypothetical protein	NA
Glyma.20G158000	hypothetical protein	AT5G52270:AT5G52270:SNARE-like superfamily protein
Glyma.20G158100	hypothetical protein	AT3G61250:MYB17:myb domain protein 17
Glyma.20G158200	hypothetical protein	NA
Glyma.20G158300	hypothetical protein	AT4G25570:ACYB-2:Cytochrome b561/ferric reductase transmembrane protein family
Glyma.20G158700	hypothetical protein	NA
Glyma.20G158800	hypothetical protein	NA