Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P54666 3-Caffeoyl-4-feruloylquinic acid 530.1391 531.1460 147
P10107 Hygrocin B 507.1872 508.1911 146
P11442 Bunazosin 373.2181 374.2261 146
P15842 505.1794 506.1878 146
P20514 Pentacarboxyl porphyrinogen III 700.2711 701.2769 146
P21007 Notoamide S 435.2469 436.2553 146
P22172 593.9022 594.9029 146
P25341 Trifenmorph 329.1779 330.1831 146
P30652 Isonigerone 570.1436 571.1515 146
P31493 Clocinizine 402.1832 403.1902 146

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G157500 hypothetical protein AT3G48880:AT3G48880:RNI-like superfamily protein 0
Glyma.20G157600 hypothetical protein AT4G25540:MSH3:homolog of DNA mismatch repair protein MSH3 0
Glyma.20G157800 hypothetical protein AT4G25550:AT4G25550:Cleavage/polyadenylation specificity factor, 25kDa subunit 0
Glyma.20G157900 hypothetical protein NA 0
Glyma.20G158000 hypothetical protein AT5G52270:AT5G52270:SNARE-like superfamily protein 0
Glyma.20G158100 hypothetical protein AT3G61250:MYB17:myb domain protein 17 0
Glyma.20G158200 hypothetical protein NA 0
Glyma.20G158300 hypothetical protein AT4G25570:ACYB-2:Cytochrome b561/ferric reductase transmembrane protein family 0
Glyma.20G158700 hypothetical protein NA 0
Glyma.20G158800 hypothetical protein NA 0