Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P13883 Kaempferol 3-O-caffeoyl-sophoroside 7-O-glucoside 934.2391 935.2481 158
P29430 Benzaldehyde 106.0416 107.0484 158
P41373 3-Benzoyloxy-6-oxo-12-ursen-28-oic acid 574.3653 575.3707 158
P45179 Spicataxine 669.3432 670.3494 158
P50043 2,5-Dimethylfuran 96.0579 97.0652 158
P05656 6,7-Dimethoxy-2-(piperazin-1-yl)quinazolin-4-amine 289.1577 290.1655 157
P22528 Adiposin 2 661.2467 662.2558 157
P29660 Artemether 298.1742 299.1810 157
P34088 2'-O-(alpha-D-Manp)-6'-O-(alpha-D-Manp-1->6-alpha-D-Manp)-(1-heptadecanoyl-sn-glycero-3-phospho-1'-myo-inositol) 1072.4778 1073.4820 157
P36081 173.1252 174.1316 157

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G157500 hypothetical protein AT3G48880:AT3G48880:RNI-like superfamily protein 0
Glyma.20G157600 hypothetical protein AT4G25540:MSH3:homolog of DNA mismatch repair protein MSH3 0
Glyma.20G157800 hypothetical protein AT4G25550:AT4G25550:Cleavage/polyadenylation specificity factor, 25kDa subunit 0
Glyma.20G157900 hypothetical protein NA 0
Glyma.20G158000 hypothetical protein AT5G52270:AT5G52270:SNARE-like superfamily protein 0
Glyma.20G158100 hypothetical protein AT3G61250:MYB17:myb domain protein 17 0
Glyma.20G158200 hypothetical protein NA 0
Glyma.20G158300 hypothetical protein AT4G25570:ACYB-2:Cytochrome b561/ferric reductase transmembrane protein family 0
Glyma.20G158700 hypothetical protein NA 0
Glyma.20G158800 hypothetical protein NA 0