Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P55446 1-(4-Hydroxyphenyl)-4,8-dimethyl-10-(2,6,6-trimethylcyclohexen-1-yl)deca-3,5,7,9-tetraen-2-one 390.2571 391.2651 —
P55448 Myrrhanol A 460.3838 461.3899 —
P55449 1-(3,4-Dichlorophenyl)urea 203.9825 204.9901 —
P55452 Flunixin 296.0745 297.0820 —
P55455 557.1670 558.1718 —
P55456 Apigenin 7-(2''-acetyl-6''-methylglucuronide) 502.1027 503.1103 —
P55458 Rosmadial 344.1611 345.1687 —
P55459 7-Methyl-6,8-bis(methylthio)pyrrolo(1,2-a)pyrazine 224.0408 225.0488 —
P55460 Propyl 1-(propylsulfinyl)propyl disulfide 240.0673 241.0731 —
P55461 Losmapimod 383.1986 384.2078 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G157500 hypothetical protein AT3G48880:AT3G48880:RNI-like superfamily protein 0
Glyma.20G157600 hypothetical protein AT4G25540:MSH3:homolog of DNA mismatch repair protein MSH3 0
Glyma.20G157800 hypothetical protein AT4G25550:AT4G25550:Cleavage/polyadenylation specificity factor, 25kDa subunit 0
Glyma.20G157900 hypothetical protein NA 0
Glyma.20G158000 hypothetical protein AT5G52270:AT5G52270:SNARE-like superfamily protein 0
Glyma.20G158100 hypothetical protein AT3G61250:MYB17:myb domain protein 17 0
Glyma.20G158200 hypothetical protein NA 0
Glyma.20G158300 hypothetical protein AT4G25570:ACYB-2:Cytochrome b561/ferric reductase transmembrane protein family 0
Glyma.20G158700 hypothetical protein NA 0
Glyma.20G158800 hypothetical protein NA 0