Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P55273 Cistanoside D 652.2406 653.2558 —
P55274 Clobenzorex 259.1142 260.1207 —
P55275 609.7594 610.7622 —
P55277 Tiegusanin I 570.2441 571.2512 —
P55281 607.8298 608.8337 —
P55282 Difluprednate 508.2267 509.2321 —
P55283 Aerobactin 564.2307 565.2395 —
P55284 Boletocrocin B 499.2284 500.2320 —
P55285 Nicotaxine 555.2530 556.2628 —
P55289 608.8615 609.8654 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G157500 hypothetical protein AT3G48880:AT3G48880:RNI-like superfamily protein 0
Glyma.20G157600 hypothetical protein AT4G25540:MSH3:homolog of DNA mismatch repair protein MSH3 0
Glyma.20G157800 hypothetical protein AT4G25550:AT4G25550:Cleavage/polyadenylation specificity factor, 25kDa subunit 0
Glyma.20G157900 hypothetical protein NA 0
Glyma.20G158000 hypothetical protein AT5G52270:AT5G52270:SNARE-like superfamily protein 0
Glyma.20G158100 hypothetical protein AT3G61250:MYB17:myb domain protein 17 0
Glyma.20G158200 hypothetical protein NA 0
Glyma.20G158300 hypothetical protein AT4G25570:ACYB-2:Cytochrome b561/ferric reductase transmembrane protein family 0
Glyma.20G158700 hypothetical protein NA 0
Glyma.20G158800 hypothetical protein NA 0