Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Open full metabolite explorer

Metabolite ID	Candidate annotation	Deionized mass (Da)	Average m/z	Associated genes (overlap)
P09497	2,5-Dimethylfuran	96.0575	97.0642	193
P10553		299.1808	300.1868	193
P18019	AH 135Y	291.1104	292.1177	193
P29144	2-Hexyl-5-methyl-3(2H)-furanone	182.1294	183.1365	193
P37333	Xanthobaccin C	494.2826	495.2901	193
P40190	Tasumatrol F	632.2808	633.2882	193
P40307	Dolaconine	419.2601	420.2671	193
P00145	Limonenecarboxylic acid	180.1121	181.1181	192
P01028	Lamiridosin A	260.0890	261.0946	192
P03908		438.5879	439.5923	192

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Open full gene explorer

Gene ID	Description	Arabidopsis ortholog
Glyma.20G157500	hypothetical protein	AT3G48880:AT3G48880:RNI-like superfamily protein
Glyma.20G157600	hypothetical protein	AT4G25540:MSH3:homolog of DNA mismatch repair protein MSH3
Glyma.20G157800	hypothetical protein	AT4G25550:AT4G25550:Cleavage/polyadenylation specificity factor, 25kDa subunit
Glyma.20G157900	hypothetical protein	NA
Glyma.20G158000	hypothetical protein	AT5G52270:AT5G52270:SNARE-like superfamily protein
Glyma.20G158100	hypothetical protein	AT3G61250:MYB17:myb domain protein 17
Glyma.20G158200	hypothetical protein	NA
Glyma.20G158300	hypothetical protein	AT4G25570:ACYB-2:Cytochrome b561/ferric reductase transmembrane protein family
Glyma.20G158700	hypothetical protein	NA
Glyma.20G158800	hypothetical protein	NA