Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P08885 (5R,6S)-5,6-Epoxy-7-megastigmen-9-one 208.1431 209.1505 132
P09401 1-dodecanoyl-glycero-3-phosphoserine 441.2078 442.2136 132
P11790 136.0860 137.0936 132
P11944 2-Methoxyacetaminophen glucuronide 357.1057 358.1110 132
P12409 Ericamycin 499.1248 500.1304 132
P14079 Methyl salicylate O-[rhamnosyl-(1->6)-glucoside] 460.1563 461.1634 132
P17202 2,3-Dihydro-1H-pyrrolizine-5-carboxaldehyde 135.0669 136.0743 132
P21264 161.0127 162.0209 132
P21412 Anadur 506.3413 507.3481 132
P23158 Methyl n-formylanthranilate 179.0589 180.0657 132

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G156300 Putative non-specific lipid-transfer protein 14 AT5G62065:AT5G62065:Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein 0
Glyma.20G156400 hypothetical protein AT5G07250:RBL3:RHOMBOID-like protein 3 0
Glyma.20G156500 hypothetical protein AT5G52170:HDG7:homeodomain GLABROUS 7 0
Glyma.20G156700 hypothetical protein AT5G07280:EMS1:Leucine-rich repeat transmembrane protein kinase 0
Glyma.20G156800 HSF-38 heat stress transcription factor 38 AT5G62020:HSFB2A:heat shock transcription factor B2A 0
Glyma.20G156900 hypothetical protein AT5G52180:AT5G52180:transmembrane protein 161AB protein 0
Glyma.20G157100 hypothetical protein AT5G52190:AT5G52190:Sugar isomerase (SIS) family protein 0
Glyma.20G157200 hypothetical protein AT5G52200:I-2:phosphoprotein phosphatase inhibitor 0
Glyma.20G157300 hypothetical protein NA 0
Glyma.20G157400 hypothetical protein NA 0