Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P32263 4-Hydroxydemethylmedicarpin 272.0676 273.0760 147
P33257 2,5-Diisopropyl-3-methylphenol 192.1493 193.1574 147
P36560 10-Hydroxy-cadin-4-en-3-one 236.1744 473.3583 147
P43847 Didemniserinolipid B 663.4039 664.4119 147
P44113 645.4166 646.4222 147
P45062 Valylproline 214.1328 215.1400 147
P46904 455.6709 456.6799 147
P47349 797.9366 798.9377 147
P47397 Prolyl-Arginine 271.1624 272.1709 147
P51669 353.1550 354.1626 147

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G156300 Putative non-specific lipid-transfer protein 14 AT5G62065:AT5G62065:Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein 0
Glyma.20G156400 hypothetical protein AT5G07250:RBL3:RHOMBOID-like protein 3 0
Glyma.20G156500 hypothetical protein AT5G52170:HDG7:homeodomain GLABROUS 7 0
Glyma.20G156700 hypothetical protein AT5G07280:EMS1:Leucine-rich repeat transmembrane protein kinase 0
Glyma.20G156800 HSF-38 heat stress transcription factor 38 AT5G62020:HSFB2A:heat shock transcription factor B2A 0
Glyma.20G156900 hypothetical protein AT5G52180:AT5G52180:transmembrane protein 161AB protein 0
Glyma.20G157100 hypothetical protein AT5G52190:AT5G52190:Sugar isomerase (SIS) family protein 0
Glyma.20G157200 hypothetical protein AT5G52200:I-2:phosphoprotein phosphatase inhibitor 0
Glyma.20G157300 hypothetical protein NA 0
Glyma.20G157400 hypothetical protein NA 0