Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P03801 Lapathoside D 634.1878 635.1980 147
P04489 Antibiotic AA 57 312.0761 313.0854 147
P10181 Genistein 7,4'-bis(O-glucosylapioside) 858.2449 859.2537 147
P12065 Cynanoneside A 314.1006 315.1069 147
P12164 Guvacoline 141.0781 142.0853 147
P13121 Callysponginol sulfate A 458.2712 459.2756 147
P22139 27-O-Demethyl-25-O-desacetylrifamycin SV 641.2830 642.2916 147
P22588 6-Carboxymethyl-3,5-dimethyl-4-hydroxypyridin-2-ol 197.0666 198.0749 147
P27228 957.3498 958.3567 147
P30187 Mpomeovt 1074.4928 1075.4968 147

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G156300 Putative non-specific lipid-transfer protein 14 AT5G62065:AT5G62065:Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein 0
Glyma.20G156400 hypothetical protein AT5G07250:RBL3:RHOMBOID-like protein 3 0
Glyma.20G156500 hypothetical protein AT5G52170:HDG7:homeodomain GLABROUS 7 0
Glyma.20G156700 hypothetical protein AT5G07280:EMS1:Leucine-rich repeat transmembrane protein kinase 0
Glyma.20G156800 HSF-38 heat stress transcription factor 38 AT5G62020:HSFB2A:heat shock transcription factor B2A 0
Glyma.20G156900 hypothetical protein AT5G52180:AT5G52180:transmembrane protein 161AB protein 0
Glyma.20G157100 hypothetical protein AT5G52190:AT5G52190:Sugar isomerase (SIS) family protein 0
Glyma.20G157200 hypothetical protein AT5G52200:I-2:phosphoprotein phosphatase inhibitor 0
Glyma.20G157300 hypothetical protein NA 0
Glyma.20G157400 hypothetical protein NA 0