Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P10655 888.1522 889.1623 169
P11117 431.7028 432.7092 169
P12129 408.9855 409.9918 169
P22795 Rhodiolinin 480.1040 481.1141 169
P24976 (20R,22R)-20-O,22-O-(5'-hydroxy-methyl)-furfurylidene-2beta,3beta,25-trihydroxy-14beta-methyl-18-nor-5beta-cholesta-7,12-dien-6-one 570.3155 571.3229 169
P25855 Israpafant 488.1811 489.1888 169
P32815 826.3427 827.3454 169
P46002 Albothricin 500.2704 501.2788 169
P53391 NA 30851A 670.2612 671.2685 169
P06861 Idrapril 258.1185 259.1256 168

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G156300 Putative non-specific lipid-transfer protein 14 AT5G62065:AT5G62065:Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein 0
Glyma.20G156400 hypothetical protein AT5G07250:RBL3:RHOMBOID-like protein 3 0
Glyma.20G156500 hypothetical protein AT5G52170:HDG7:homeodomain GLABROUS 7 0
Glyma.20G156700 hypothetical protein AT5G07280:EMS1:Leucine-rich repeat transmembrane protein kinase 0
Glyma.20G156800 HSF-38 heat stress transcription factor 38 AT5G62020:HSFB2A:heat shock transcription factor B2A 0
Glyma.20G156900 hypothetical protein AT5G52180:AT5G52180:transmembrane protein 161AB protein 0
Glyma.20G157100 hypothetical protein AT5G52190:AT5G52190:Sugar isomerase (SIS) family protein 0
Glyma.20G157200 hypothetical protein AT5G52200:I-2:phosphoprotein phosphatase inhibitor 0
Glyma.20G157300 hypothetical protein NA 0
Glyma.20G157400 hypothetical protein NA 0