Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P26418 Antibiotic 273a1alpha 1112.3282 1113.3409 231
P30811 767.2566 768.2643 231
P04078 311.5769 312.5829 230
P14825 9R-hydroxy-2E,4E-decadienoic acid 184.1086 185.1164 230
P17592 175.1437 176.1505 230
P31714 4,4'-Dihydroxystilbene 212.0832 213.0898 230
P20017 343.2428 344.2506 229
P21903 Triptregeline H 611.2282 612.2377 229
P31991 Irroratin A 378.2030 379.2088 229
P26216 trans-2-Enoyl-OPC6-CoA 1013.2870 1014.2977 228

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G154700 hypothetical protein AT5G51920:AT5G51920:Pyridoxal phosphate (PLP)-dependent transferases superfamily protein 0
Glyma.20G154800 hypothetical protein AT3G56060:AT3G56060:Glucose-methanol-choline (GMC) oxidoreductase family protein__AT5G51930:AT5G51930:Glucose-methanol-choline (GMC) oxidoreductase family protein 0
Glyma.20G154900 hypothetical protein NA 0
Glyma.20G155000 hypothetical protein NA 0
Glyma.20G155100 hypothetical protein AT5G51990:CBF4:C-repeat-binding factor 4 0
Glyma.20G155200 hypothetical protein NA 0
Glyma.20G155400 hypothetical protein AT5G52040:RS41:RNA-binding (RRM/RBD/RNP motifs) family protein__AT4G25500:RS40:arginine/serine-rich splicing factor 35 0
Glyma.20G155500 hypothetical protein NA 0
Glyma.20G155700 hypothetical protein AT5G52120:PP2-A14:phloem protein 2-A14 0
Glyma.20G155900 hypothetical protein AT5G51940:NRPB6A:RNA polymerase Rpb6__AT2G04630:NRPB6B:RNA polymerase Rpb6 0