Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P03225 Chlorambucil-tertiary butyl ester 359.1400 360.1461 210
P05139 310.6259 311.6315 210
P27684 309.2743 310.2795 210
P04549 Cyclosulfamuron 421.1071 422.1091 209
P13108 Bms-707035 410.1081 411.1142 209
P14970 Benzonaphthazepine 243.1062 244.1135 209
P44253 285.6155 286.6223 209
P50982 Oleamide 281.2671 282.2752 209
P16775 PA(10:0/13:0) 522.3343 523.3435 208
P20730 1-dodecanoyl-glycero-3-phospho-(1'-myo-inositol) 516.2330 517.2397 208

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G154700 hypothetical protein AT5G51920:AT5G51920:Pyridoxal phosphate (PLP)-dependent transferases superfamily protein 0
Glyma.20G154800 hypothetical protein AT3G56060:AT3G56060:Glucose-methanol-choline (GMC) oxidoreductase family protein__AT5G51930:AT5G51930:Glucose-methanol-choline (GMC) oxidoreductase family protein 0
Glyma.20G154900 hypothetical protein NA 0
Glyma.20G155000 hypothetical protein NA 0
Glyma.20G155100 hypothetical protein AT5G51990:CBF4:C-repeat-binding factor 4 0
Glyma.20G155200 hypothetical protein NA 0
Glyma.20G155400 hypothetical protein AT5G52040:RS41:RNA-binding (RRM/RBD/RNP motifs) family protein__AT4G25500:RS40:arginine/serine-rich splicing factor 35 0
Glyma.20G155500 hypothetical protein NA 0
Glyma.20G155700 hypothetical protein AT5G52120:PP2-A14:phloem protein 2-A14 0
Glyma.20G155900 hypothetical protein AT5G51940:NRPB6A:RNA polymerase Rpb6__AT2G04630:NRPB6B:RNA polymerase Rpb6 0