Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P15527 (1S,4R)-passicapsin 417.1645 418.1754 214
P17647 Quercetin 3-sambubioside-7-glucoside 758.1981 759.2019 214
P04012 N2,N5-Diacetylornithine 216.1093 217.1155 213
P14817 Delphinidin 3-(6-malonylglucoside)-5-glucoside 712.1486 713.1566 212
P48613 Emorfazone 239.1270 240.1348 212
P06958 Adafosbuvir 545.1626 546.1675 211
P12657 4,4'-Stilbenedicarboxamidine dihydrochloride 264.1403 265.1498 211
P22693 Propanoic acid, 3-((((2-(1,1-dimethylethyl)-5-methoxy-6-benzothiazolyl)amino)thioxomethyl)thio)- 384.0657 385.0746 211
P34892 Aristolin 629.2974 630.3072 211
P37540 PA(19:2(10Z,13Z)/20:4(5Z,8Z,11Z,13E)+=O(15)) 748.4711 749.4768 211

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G154700 hypothetical protein AT5G51920:AT5G51920:Pyridoxal phosphate (PLP)-dependent transferases superfamily protein 0
Glyma.20G154800 hypothetical protein AT3G56060:AT3G56060:Glucose-methanol-choline (GMC) oxidoreductase family protein__AT5G51930:AT5G51930:Glucose-methanol-choline (GMC) oxidoreductase family protein 0
Glyma.20G154900 hypothetical protein NA 0
Glyma.20G155000 hypothetical protein NA 0
Glyma.20G155100 hypothetical protein AT5G51990:CBF4:C-repeat-binding factor 4 0
Glyma.20G155200 hypothetical protein NA 0
Glyma.20G155400 hypothetical protein AT5G52040:RS41:RNA-binding (RRM/RBD/RNP motifs) family protein__AT4G25500:RS40:arginine/serine-rich splicing factor 35 0
Glyma.20G155500 hypothetical protein NA 0
Glyma.20G155700 hypothetical protein AT5G52120:PP2-A14:phloem protein 2-A14 0
Glyma.20G155900 hypothetical protein AT5G51940:NRPB6A:RNA polymerase Rpb6__AT2G04630:NRPB6B:RNA polymerase Rpb6 0