Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P01325 7-Methoxymurrayacine 307.1223 308.1298 149
P07302 Melampyroside 450.1506 451.1589 149
P09071 888.1557 889.1645 149
P10311 2'-Cinnamoylsalicortin 554.1802 555.1831 149
P10689 1-(Pentafluorophenyl)propane 210.0480 211.0541 149
P14001 Quetiapine Sulfoxide 399.1540 400.1606 149
P16545 Sulfisomidine 278.0841 279.0918 149
P16940 5-Methylthiopentyldesulfoglucosinolate 355.1126 356.1217 149
P17252 Riddelliine N-oxide 365.1502 366.1570 149
P25789 10-Isovaleryl kanokoside C 722.3032 723.3071 149

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G152100 hypothetical protein AT5G62200:AT5G62200:Embryo-specific protein 3, (ATS3) 0
Glyma.20G152200 hypothetical protein AT5G62190:PRH75:DEAD box RNA helicase (PRH75) 0
Glyma.20G152500 hypothetical protein NA 0
Glyma.20G152600 hypothetical protein AT5G51750:SBT1.3:subtilase 1.3 0
Glyma.20G152700 hypothetical protein NA 0
Glyma.20G152800 hypothetical protein AT5G51770:AT5G51770:Protein kinase superfamily protein 0
Glyma.20G152900 hypothetical protein NA 0
Glyma.20G153000 hypothetical protein NA 0
Glyma.20G153100 hypothetical protein NA 0
Glyma.20G153200 hypothetical protein AT5G62180:CXE20:carboxyesterase 20 0