Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P55199 Neoechinulin 391.1908 392.1990 —
P55200 Oxybuprocaine 308.2048 617.4153 —
P55202 Triptregeline B 653.2490 654.2596 —
P55204 Monascorubramine 381.1973 382.2060 —
P55205 PA(20:4(5Z,8Z,11Z,14Z)/14:1(9Z)) 666.4297 667.4397 —
P55208 Menaquinol 310.1940 311.2013 —
P55211 391.3353 392.3429 —
P55212 (5Z,9Z)-2-methoxy-5,9-hexacosadienoic acid 422.3731 423.3810 —
P55213 Indocarbazostatin D 512.1345 513.1415 —
P55216 160.9605 161.9681 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G152100 hypothetical protein AT5G62200:AT5G62200:Embryo-specific protein 3, (ATS3) 0
Glyma.20G152200 hypothetical protein AT5G62190:PRH75:DEAD box RNA helicase (PRH75) 0
Glyma.20G152500 hypothetical protein NA 0
Glyma.20G152600 hypothetical protein AT5G51750:SBT1.3:subtilase 1.3 0
Glyma.20G152700 hypothetical protein NA 0
Glyma.20G152800 hypothetical protein AT5G51770:AT5G51770:Protein kinase superfamily protein 0
Glyma.20G152900 hypothetical protein NA 0
Glyma.20G153000 hypothetical protein NA 0
Glyma.20G153100 hypothetical protein NA 0
Glyma.20G153200 hypothetical protein AT5G62180:CXE20:carboxyesterase 20 0