Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P54666 3-Caffeoyl-4-feruloylquinic acid 530.1391 531.1460 147
P10107 Hygrocin B 507.1872 508.1911 146
P11442 Bunazosin 373.2181 374.2261 146
P15842 505.1794 506.1878 146
P20514 Pentacarboxyl porphyrinogen III 700.2711 701.2769 146
P21007 Notoamide S 435.2469 436.2553 146
P22172 593.9022 594.9029 146
P25341 Trifenmorph 329.1779 330.1831 146
P30652 Isonigerone 570.1436 571.1515 146
P31493 Clocinizine 402.1832 403.1902 146

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G151100 hypothetical protein AT2G32980:AUG2:HAUS augmin-like complex subunit 0
Glyma.20G151200 hypothetical protein NA 0
Glyma.20G151300 hypothetical protein AT1G04210:AT1G04210:Leucine-rich repeat protein kinase family protein 0
Glyma.20G151400 hypothetical protein AT5G43810:AGO10:Stabilizer of iron transporter SufD / Polynucleotidyl transferase 0
Glyma.20G151500 hypothetical protein AT5G43780:APS4:Pseudouridine synthase/archaeosine transglycosylase-like family protein__AT3G22890:APS1:ATP sulfurylase 1 0
Glyma.20G151600 hypothetical protein AT5G19910:MED31:SOH1 family protein 0
Glyma.20G151700 hypothetical protein NA 0
Glyma.20G151800 hypothetical protein AT5G62230:ERL1:ERECTA-like 1 0
Glyma.20G151900 RAR1-2 CHORD superfamily protein AT5G51700:PBS2:cysteine and histidine-rich domain-containing protein RAR1 0
Glyma.20G152000 hypothetical protein AT5G62220:GT18:glycosyltransferase 18 0