Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Open full metabolite explorer

Metabolite ID	Candidate annotation	Deionized mass (Da)	Average m/z	Associated genes (overlap)
P16645	Kaempferol 3-glucosyl-(1->3)(4'''-acetylrhamnosyl)(1->6)-galactoside	798.2244	799.2340	148
P20011	Hypochoeroside K	398.2269	399.2334	148
P23266	beta-D-Glucopyranosylurea	222.0841	223.0933	148
P25645		753.3378	754.3431	148
P27574	TG(15:0/O-18:0/20:5(5Z,8Z,11Z,14Z,17Z))	852.7692	853.7736	148
P31267	1-Tert-butyl-3-(4-chlorophenyl)-1H-pyrazolo[3,4-d]pyrimidin-4-amine	301.1109	302.1196	148
P33516		246.0379	247.0455	148
P50052	A6 Peptide	910.4374	911.4474	148
P50482	3,5,5-Trimethyl-1,2-cyclohexanedione	154.0987	155.1055	148
P52065	Glycocholic acid	465.3083	466.3132	148

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Open full gene explorer

Gene ID	Alias	Description	Arabidopsis ortholog
Glyma.20G149500		hypothetical protein	NA
Glyma.20G149600		hypothetical protein	AT4G14750:IQD19:IQ-domain 19
Glyma.20G149700		hypothetical protein	NA
Glyma.20G149800		hypothetical protein	NA
Glyma.20G150000		hypothetical protein	NA
Glyma.20G150200		hypothetical protein	AT4G14710:ATARD2:RmlC-like cupins superfamily protein
Glyma.20G150400		hypothetical protein	NA
Glyma.20G150600	ELIP	early light-induced protein	AT3G22840:ELIP1:Chlorophyll A-B binding family protein
Glyma.20G150700		hypothetical protein	AT3G22845:AT3G22845:emp24/gp25L/p24 family/GOLD family protein
Glyma.20G151000		hypothetical protein	NA