Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P31215 966.3363 967.3449 180
P37602 (6R)-9,10-Dihydroxy-4,7-megastigmadien-3-one-9-O-beta-D-glucopyranoside 386.1922 387.2002 180
P41095 423.3575 424.3622 180
P49211 Bamifylline 385.2106 386.2173 180
P06876 Lembyne A 342.0021 343.0076 179
P14986 N-(2-hydroxyhexadecanoyl)-sphinganine 555.5217 556.5296 179
P21946 999.3356 1000.3371 179
P23960 Upunaphenol N 934.2723 935.2842 179
P29027 Bazzanin J 492.0855 493.0949 179
P35945 475.1093 476.1172 179

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G149500 hypothetical protein NA 0
Glyma.20G149600 hypothetical protein AT4G14750:IQD19:IQ-domain 19 0
Glyma.20G149700 hypothetical protein NA 0
Glyma.20G149800 hypothetical protein NA 0
Glyma.20G150000 hypothetical protein NA 0
Glyma.20G150200 hypothetical protein AT4G14710:ATARD2:RmlC-like cupins superfamily protein 0
Glyma.20G150400 hypothetical protein NA 0
Glyma.20G150600 ELIP early light-induced protein AT3G22840:ELIP1:Chlorophyll A-B binding family protein 0
Glyma.20G150700 hypothetical protein AT3G22845:AT3G22845:emp24/gp25L/p24 family/GOLD family protein 0
Glyma.20G151000 hypothetical protein NA 0