Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P24428 Talniflumate 414.0784 415.0855 205
P25466 Niazinin 343.1126 344.1185 205
P15762 Aristoloterpenate II 527.1950 528.2020 204
P03342 D-Alanyl-alanyl-poly(glycerolphosphate) 314.0858 315.0931 203
P05821 Pandangolide 3 362.1408 363.1478 203
P12578 4E,6E-undecenal 166.1341 167.1417 203
P14723 1-(9Z-octadecenoyl)-2-(5-oxo-7-carboxy-6E-heptenoyl)-sn-glycero-3-phosphoserine 691.3337 692.3416 203
P53229 Leurubicin 656.2476 657.2525 203
P13994 2-Methyl-1-hydroxypropyl-ThPP 496.0955 497.1062 202
P39176 Microtoenin C 941.5023 942.5093 202

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G149500 hypothetical protein NA 0
Glyma.20G149600 hypothetical protein AT4G14750:IQD19:IQ-domain 19 0
Glyma.20G149700 hypothetical protein NA 0
Glyma.20G149800 hypothetical protein NA 0
Glyma.20G150000 hypothetical protein NA 0
Glyma.20G150200 hypothetical protein AT4G14710:ATARD2:RmlC-like cupins superfamily protein 0
Glyma.20G150400 hypothetical protein NA 0
Glyma.20G150600 ELIP early light-induced protein AT3G22840:ELIP1:Chlorophyll A-B binding family protein 0
Glyma.20G150700 hypothetical protein AT3G22845:AT3G22845:emp24/gp25L/p24 family/GOLD family protein 0
Glyma.20G151000 hypothetical protein NA 0