Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P08385 2'-N-Hydroxynocardicin C 502.1713 503.1770 135
P14806 [3R-(3alpha,4beta,5alpha,5aalpha,6alpha,9beta,9aalpha,10R*)]-5-(Acetyloxy)-6-(benzoyloxy)octahydro-4,9-dihydroxy-2,2,5a,9-tetramethyl-2H-3,9a-methano-1-benzoxepin-10-yl ester 3-pyridinecarboxylic acid 553.2239 554.2323 135
P15635 4-Aminophenylacetic acid 151.0649 152.0709 135
P17046 5,5-Dimethyl-1-ethyl-1,3-cyclopentadiene 122.1084 123.1157 135
P19081 2-Methyl-1-hydroxybutyl-ThPP 510.1174 511.1224 135
P21894 N-[4-[3-Chloro-4-(2-pyridinylmethoxy)anilino]-3-cyano-7-ethoxy-6-quinolinyl]-4-(dimethylamino)-2-butenamide 556.1973 557.2054 135
P35539 2 Inverted exclamation marka,7 inverted exclamation marka-Dichlorodihydrofluorescein diacetate 486.0292 487.0326 135
P41280 425.6856 426.6953 135
P44414 Wattoside H 688.3271 689.3351 135
P44478 Curassavioside G1 1034.5412 1035.5401 135

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G148300 CG-2 NA 0
Glyma.20G148400 CG-3 beta-conglycinin alpha-subunit NA 0
Glyma.20G148500 hypothetical protein NA 0
Glyma.20G148600 hypothetical protein AT2G32010:CVL1:CVP2 like 1 0
Glyma.20G148700 hypothetical protein NA 0
Glyma.20G148800 hypothetical protein AT1G29900:CARB:carbamoyl phosphate synthetase B 0
Glyma.20G148900 hypothetical protein AT3G22740:HMT3:homocysteine S-methyltransferase 3 0
Glyma.20G149100 hypothetical protein AT4G14770:TCX2:TESMIN/TSO1-like CXC 2 0
Glyma.20G149300 hypothetical protein AT2G32030:AT2G32030:Acyl-CoA N-acyltransferases (NAT) superfamily protein 0
Glyma.20G149400 hypothetical protein NA 0