Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Open full metabolite explorer

Metabolite ID	Candidate annotation	Deionized mass (Da)	Average m/z	Associated genes (overlap)
P01785		428.0342	429.0403	137
P03606	N-(gamma-Glutamyl)ethanolamine	190.0927	191.1000	137
P09770	(E)-Methyl-4-hydroxycinnamate	178.0624	179.0690	137
P12839	2S-(6,12-dichloro-dodecanoyloxy)-propanoic acid	340.1245	341.1322	137
P16672	(+)-(R)-(E)-3'-Hydroxyartemidin	216.0801	217.0867	137
P17329	3,5,5-Trimethyl-1,2-cyclohexanedione	154.0982	155.1055	137
P23820	Teucrolin D	438.1882	439.1937	137
P24445	Isobetanidin-6-O-beta-sophoroside	712.2079	713.2204	137
P24826	Actinoplanone G	618.1737	619.1789	137
P32466	Anadur	506.3394	507.3483	137

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Open full gene explorer

Gene ID	Alias	Description	Arabidopsis ortholog
Glyma.20G148300	CG-2		NA
Glyma.20G148400	CG-3	beta-conglycinin alpha-subunit	NA
Glyma.20G148500		hypothetical protein	NA
Glyma.20G148600		hypothetical protein	AT2G32010:CVL1:CVP2 like 1
Glyma.20G148700		hypothetical protein	NA
Glyma.20G148800		hypothetical protein	AT1G29900:CARB:carbamoyl phosphate synthetase B
Glyma.20G148900		hypothetical protein	AT3G22740:HMT3:homocysteine S-methyltransferase 3
Glyma.20G149100		hypothetical protein	AT4G14770:TCX2:TESMIN/TSO1-like CXC 2
Glyma.20G149300		hypothetical protein	AT2G32030:AT2G32030:Acyl-CoA N-acyltransferases (NAT) superfamily protein
Glyma.20G149400		hypothetical protein	NA