Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

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Metabolite ID	Candidate annotation	Deionized mass (Da)	Average m/z	Associated genes (overlap)
P18070	Cymbidine A	949.4154	950.4239	236
P25621	Pseudoanisatin	298.1384	299.1467	236
P47300		534.7868	535.7927	236
P31222	Sufotidine	421.2096	422.2177	235
P03976	Dilmapimod	456.1404	457.1517	234
P53033	7-Oxononane-1,1,9-tricarbaldehyde	226.1222	227.1285	234
P05631	Trimethyl orthoacetate	120.0775	121.0848	233
P13790		317.1926	318.1997	233
P23295	3beta-(4-Iodophenyl)tropan-2beta-carboxylic acid isopropyl ester	413.0800	414.0838	233
P11101	L-beta-aspartyl-L-phenylalanine	280.1044	281.1122	231

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

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Gene ID	Alias	Description	Arabidopsis ortholog
Glyma.20G148300	CG-2		NA
Glyma.20G148400	CG-3	beta-conglycinin alpha-subunit	NA
Glyma.20G148500		hypothetical protein	NA
Glyma.20G148600		hypothetical protein	AT2G32010:CVL1:CVP2 like 1
Glyma.20G148700		hypothetical protein	NA
Glyma.20G148800		hypothetical protein	AT1G29900:CARB:carbamoyl phosphate synthetase B
Glyma.20G148900		hypothetical protein	AT3G22740:HMT3:homocysteine S-methyltransferase 3
Glyma.20G149100		hypothetical protein	AT4G14770:TCX2:TESMIN/TSO1-like CXC 2
Glyma.20G149300		hypothetical protein	AT2G32030:AT2G32030:Acyl-CoA N-acyltransferases (NAT) superfamily protein
Glyma.20G149400		hypothetical protein	NA