Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P37074 Ankalactone 338.1703 339.1787 145
P44378 Malyngamide P 457.2574 458.2627 145
P44487 PIP(20:0/18:1(12Z)-2OH(9,10)) 1004.5455 1005.5421 145
P45739 Pubescenine 495.2845 496.2922 145
P46931 670.2582 671.2691 145
P54280 Brachycerine 546.2208 547.2298 145
P00923 Parguerol 456.1477 457.1530 144
P03962 18-hydroxyjaconine 403.1426 404.1512 144
P06903 259.0544 260.0620 144
P09821 L-Leucine-p-nitroanilide 251.1247 252.1302 144

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G148300 CG-2 NA 0
Glyma.20G148400 CG-3 beta-conglycinin alpha-subunit NA 0
Glyma.20G148500 hypothetical protein NA 0
Glyma.20G148600 hypothetical protein AT2G32010:CVL1:CVP2 like 1 0
Glyma.20G148700 hypothetical protein NA 0
Glyma.20G148800 hypothetical protein AT1G29900:CARB:carbamoyl phosphate synthetase B 0
Glyma.20G148900 hypothetical protein AT3G22740:HMT3:homocysteine S-methyltransferase 3 0
Glyma.20G149100 hypothetical protein AT4G14770:TCX2:TESMIN/TSO1-like CXC 2 0
Glyma.20G149300 hypothetical protein AT2G32030:AT2G32030:Acyl-CoA N-acyltransferases (NAT) superfamily protein 0
Glyma.20G149400 hypothetical protein NA 0