Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Open full metabolite explorer

Metabolite ID	Candidate annotation	Deionized mass (Da)	Average m/z	Associated genes (overlap)
P02197	Ponticaepoxide	182.0745	183.0824	173
P09241		683.2025	684.2094	173
P12520	L-Leucine-p-nitroanilide	251.1255	252.1347	173
P16284		511.7656	512.7723	173
P20181	(2-Naphthyl)methanol	158.0725	159.0790	173
P22382	Diphenylcarbazide	242.1167	243.1217	173
P26425	Cinnacassiol	842.3264	843.3399	173
P29775	Galangin 5-methyl ether	284.0665	285.0738	173
P36562	Phthalsaurediethylhexylester	306.1814	613.3688	173
P38062	2,2'-Dinor-beta,beta-carotene-3,4,3',4'-tetrone	564.3207	565.3290	173

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Open full gene explorer

Gene ID	Alias	Description	Arabidopsis ortholog
Glyma.20G148300	CG-2		NA
Glyma.20G148400	CG-3	beta-conglycinin alpha-subunit	NA
Glyma.20G148500		hypothetical protein	NA
Glyma.20G148600		hypothetical protein	AT2G32010:CVL1:CVP2 like 1
Glyma.20G148700		hypothetical protein	NA
Glyma.20G148800		hypothetical protein	AT1G29900:CARB:carbamoyl phosphate synthetase B
Glyma.20G148900		hypothetical protein	AT3G22740:HMT3:homocysteine S-methyltransferase 3
Glyma.20G149100		hypothetical protein	AT4G14770:TCX2:TESMIN/TSO1-like CXC 2
Glyma.20G149300		hypothetical protein	AT2G32030:AT2G32030:Acyl-CoA N-acyltransferases (NAT) superfamily protein
Glyma.20G149400		hypothetical protein	NA