Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Open full metabolite explorer

Metabolite ID	Candidate annotation	Deionized mass (Da)	Average m/z	Associated genes (overlap)
P04038		273.6501	274.6556	262
P17302	Candoxatrilat	399.2291	400.2364	262
P09522	1-Sinapoyl-2,2'-diferuloylgentiobiose	900.2729	901.2756	259
P39463	3-Methoxy-19-norpregna-1,3,5(10)-trien-20-one	312.2143	313.2233	259
P18970	Deoxypumiloside	496.1831	497.1903	257
P30042		939.4715	940.4808	257
P49351	3,16'-Dihydroxy-beta,chi-caroten-4-one	578.3786	579.3833	256
P19113	Lyngbyabellin E	863.2426	864.2468	255
P14677	S-(9-hydroxy-PGA1)-glutathione	645.3312	646.3359	254
P42876	Curassavioside D1	1020.5233	1021.5370	251

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Open full gene explorer

Gene ID	Alias	Description	Arabidopsis ortholog
Glyma.20G148300	CG-2		NA
Glyma.20G148400	CG-3	beta-conglycinin alpha-subunit	NA
Glyma.20G148500		hypothetical protein	NA
Glyma.20G148600		hypothetical protein	AT2G32010:CVL1:CVP2 like 1
Glyma.20G148700		hypothetical protein	NA
Glyma.20G148800		hypothetical protein	AT1G29900:CARB:carbamoyl phosphate synthetase B
Glyma.20G148900		hypothetical protein	AT3G22740:HMT3:homocysteine S-methyltransferase 3
Glyma.20G149100		hypothetical protein	AT4G14770:TCX2:TESMIN/TSO1-like CXC 2
Glyma.20G149300		hypothetical protein	AT2G32030:AT2G32030:Acyl-CoA N-acyltransferases (NAT) superfamily protein
Glyma.20G149400		hypothetical protein	NA