Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P30741 3-(Allyloxy)estra-1,3,5(10)-triene-16beta,17beta-diol 328.2035 329.2092 187
P31583 Rhusemialin A 582.2091 583.2134 187
P46610 Sarpogrelate 429.2126 430.2176 187
P03242 S-Adenosyl-L-homocysteine 384.1215 385.1299 186
P09306 6Z-octenoic acid 142.0971 143.1040 186
P19172 5-Hydroxydec-8-enedioylcarnitine 359.2012 360.2078 186
P35787 PG(a-25:0/PGD2) 944.6181 945.6254 186
P51071 Luteolin 7-(2''-glucosyllactate) 520.1177 521.1264 186
P53404 2-Chloro-4-[(dimethylcarbamoyl)amino]benzoic acid 242.0430 243.0520 186
P11526 (-)-2,3-Dihydrocitromycetin 292.0562 293.0641 185

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G148300 CG-2 NA 0
Glyma.20G148400 CG-3 beta-conglycinin alpha-subunit NA 0
Glyma.20G148500 hypothetical protein NA 0
Glyma.20G148600 hypothetical protein AT2G32010:CVL1:CVP2 like 1 0
Glyma.20G148700 hypothetical protein NA 0
Glyma.20G148800 hypothetical protein AT1G29900:CARB:carbamoyl phosphate synthetase B 0
Glyma.20G148900 hypothetical protein AT3G22740:HMT3:homocysteine S-methyltransferase 3 0
Glyma.20G149100 hypothetical protein AT4G14770:TCX2:TESMIN/TSO1-like CXC 2 0
Glyma.20G149300 hypothetical protein AT2G32030:AT2G32030:Acyl-CoA N-acyltransferases (NAT) superfamily protein 0
Glyma.20G149400 hypothetical protein NA 0