Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

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Metabolite ID	Candidate annotation	Deionized mass (Da)	Average m/z	Associated genes (overlap)
P48190	Norselic acid B	456.3251	457.3331	140
P51989	Clethric acid	504.3413	505.3472	140
P01114		149.0104	150.0180	139
P01443	TRIBOA	197.0306	198.0372	139
P02352	6-Carboxymethyl-3,5-dimethyl-4-hydroxypyridin-2-ol	197.0672	198.0748	139
P05844	Octanedioylcarnitine	317.1879	318.1957	139
P07296		292.6173	293.6228	139
P08614	N-Butyryl-L-homoserine lactone	171.0875	172.0951	139
P11699	2-(2-Phenylethenylsulfonyl)ethenylbenzene	270.0700	271.0793	139
P12353	Methdilazine	296.1377	297.1442	139

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Open full gene explorer

Gene ID	Alias	Description	Arabidopsis ortholog
Glyma.20G147300		hypothetical protein	NA
Glyma.20G147400		hypothetical protein	AT4G14830:HSP1:__AT3G22530:AT3G22530:heat shock protein
Glyma.20G147500		hypothetical protein	NA
Glyma.20G147600	PM25	seed maturation protein PM25	AT3G22490:AT3G22490:Seed maturation protein__AT3G22500:ATECP31:Seed maturation protein
Glyma.20G147700		hypothetical protein	AT1G05420:OFP12:ovate family protein 12
Glyma.20G147800		hypothetical protein	NA
Glyma.20G147900		hypothetical protein	NA
Glyma.20G148000		hypothetical protein	NA
Glyma.20G148100		hypothetical protein	AT4G14880:OASA1:O-acetylserine (thiol) lyase (OAS-TL) isoform A1
Glyma.20G148200	CG-BETA-2	beta-conglycinin, beta chain-like	NA