Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

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Metabolite ID	Candidate annotation	Deionized mass (Da)	Average m/z	Associated genes (overlap)
P01325	7-Methoxymurrayacine	307.1223	308.1298	149
P07302	Melampyroside	450.1506	451.1589	149
P09071		888.1557	889.1645	149
P10311	2'-Cinnamoylsalicortin	554.1802	555.1831	149
P10689	1-(Pentafluorophenyl)propane	210.0480	211.0541	149
P14001	Quetiapine Sulfoxide	399.1540	400.1606	149
P16545	Sulfisomidine	278.0841	279.0918	149
P16940	5-Methylthiopentyldesulfoglucosinolate	355.1126	356.1217	149
P17252	Riddelliine N-oxide	365.1502	366.1570	149
P25789	10-Isovaleryl kanokoside C	722.3032	723.3071	149

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Open full gene explorer

Gene ID	Alias	Description	Arabidopsis ortholog
Glyma.20G147300		hypothetical protein	NA
Glyma.20G147400		hypothetical protein	AT4G14830:HSP1:__AT3G22530:AT3G22530:heat shock protein
Glyma.20G147500		hypothetical protein	NA
Glyma.20G147600	PM25	seed maturation protein PM25	AT3G22490:AT3G22490:Seed maturation protein__AT3G22500:ATECP31:Seed maturation protein
Glyma.20G147700		hypothetical protein	AT1G05420:OFP12:ovate family protein 12
Glyma.20G147800		hypothetical protein	NA
Glyma.20G147900		hypothetical protein	NA
Glyma.20G148000		hypothetical protein	NA
Glyma.20G148100		hypothetical protein	AT4G14880:OASA1:O-acetylserine (thiol) lyase (OAS-TL) isoform A1
Glyma.20G148200	CG-BETA-2	beta-conglycinin, beta chain-like	NA