Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Open full metabolite explorer

Metabolite ID	Candidate annotation	Deionized mass (Da)	Average m/z	Associated genes (overlap)
P55566	Boceprevir	519.3459	520.3522	—
P55567		114.9560	115.9638	—
P55568		134.9625	135.9704	—
P55569	Cyromazine	166.0977	167.1054	—
P55570		232.8916	233.8992	—
P55573		609.1749	610.1805	—
P55575	Tebufelone	300.2051	601.4175	—
P55578		333.8152	334.8227	—
P55579		259.8976	260.9052	—
P55580		253.9070	254.9140	—

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Open full gene explorer

Gene ID	Alias	Description	Arabidopsis ortholog
Glyma.20G147300		hypothetical protein	NA
Glyma.20G147400		hypothetical protein	AT4G14830:HSP1:__AT3G22530:AT3G22530:heat shock protein
Glyma.20G147500		hypothetical protein	NA
Glyma.20G147600	PM25	seed maturation protein PM25	AT3G22490:AT3G22490:Seed maturation protein__AT3G22500:ATECP31:Seed maturation protein
Glyma.20G147700		hypothetical protein	AT1G05420:OFP12:ovate family protein 12
Glyma.20G147800		hypothetical protein	NA
Glyma.20G147900		hypothetical protein	NA
Glyma.20G148000		hypothetical protein	NA
Glyma.20G148100		hypothetical protein	AT4G14880:OASA1:O-acetylserine (thiol) lyase (OAS-TL) isoform A1
Glyma.20G148200	CG-BETA-2	beta-conglycinin, beta chain-like	NA