Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

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Metabolite ID	Candidate annotation	Deionized mass (Da)	Average m/z	Associated genes (overlap)
P12304	Amrubicin	483.1476	484.1512	176
P17789	Kaempferol 3-neohesperidoside-7-(6''-malonylglucoside)	872.2263	873.2325	176
P20561		669.1601	670.1662	176
P29540	Kadsuphilol L	606.2044	607.2073	176
P29563	Sulfocostunolide A	312.1036	313.1116	176
P29935	Acantrifoside A	942.5143	943.5248	176
P36283	Isopropyl dodecylfluorophosphonate	294.2113	295.2185	176
P38088		365.6483	366.6561	176
P00499	1-Pentanesulfonic acid	152.0504	153.0569	175
P32791	Tenuecyclamide A	460.0996	461.1056	175

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

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Gene ID	Alias	Description	Arabidopsis ortholog
Glyma.20G147300		hypothetical protein	NA
Glyma.20G147400		hypothetical protein	AT4G14830:HSP1:__AT3G22530:AT3G22530:heat shock protein
Glyma.20G147500		hypothetical protein	NA
Glyma.20G147600	PM25	seed maturation protein PM25	AT3G22490:AT3G22490:Seed maturation protein__AT3G22500:ATECP31:Seed maturation protein
Glyma.20G147700		hypothetical protein	AT1G05420:OFP12:ovate family protein 12
Glyma.20G147800		hypothetical protein	NA
Glyma.20G147900		hypothetical protein	NA
Glyma.20G148000		hypothetical protein	NA
Glyma.20G148100		hypothetical protein	AT4G14880:OASA1:O-acetylserine (thiol) lyase (OAS-TL) isoform A1
Glyma.20G148200	CG-BETA-2	beta-conglycinin, beta chain-like	NA