Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P02131 Eustifoline D 221.0836 222.0913 182
P24545 5-Methoxy-3,4-methylenedioxyamphetamine 209.1042 210.1126 182
P37572 28-Glucosyloleanolic acid 3-[rhamnosyl-(1->2)-galactosyl-(1->3)-glucuronide] 1116.5415 1117.5463 182
P43306 102.0458 103.0535 182
P05454 Leonuriside A 332.1106 333.1163 181
P06475 (+)-5,17-Dehydromatrine N-oxide 262.1661 263.1722 181
P16872 Methyl-4-O-caffeoylquinate 368.1086 369.1180 181
P21471 Illifunone C 252.1331 253.1413 181
P33036 1,5-Dihydro-7-(1-piperidinyl)-imidazo(2,1-b)quinazolin-2(3H)-one 270.1495 271.1555 181
P52796 Famprofazone 377.2443 378.2528 181

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G147300 hypothetical protein NA 0
Glyma.20G147400 hypothetical protein AT4G14830:HSP1:__AT3G22530:AT3G22530:heat shock protein 0
Glyma.20G147500 hypothetical protein NA 0
Glyma.20G147600 PM25 seed maturation protein PM25 AT3G22490:AT3G22490:Seed maturation protein__AT3G22500:ATECP31:Seed maturation protein 0
Glyma.20G147700 hypothetical protein AT1G05420:OFP12:ovate family protein 12 0
Glyma.20G147800 hypothetical protein NA 0
Glyma.20G147900 hypothetical protein NA 0
Glyma.20G148000 hypothetical protein NA 0
Glyma.20G148100 hypothetical protein AT4G14880:OASA1:O-acetylserine (thiol) lyase (OAS-TL) isoform A1 0
Glyma.20G148200 CG-BETA-2 beta-conglycinin, beta chain-like NA 0