Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P29783 Triptregeline I 589.2398 590.2460 138
P30687 623.7960 624.8037 138
P33333 873.1893 874.1999 138
P39647 1,10-Epoxy-aristolane 220.1808 441.3688 138
P41900 Sinuolatin A 396.2153 397.2208 138
P41927 6beta-(2'-Methylbutanoyloxy)-10beta-hydroxy-8alpha-methoxyeremophil-7(11)-en-12,8beta-olide 380.2187 381.2246 138
P43144 545.2495 546.2561 138
P48892 (3E,5Z)-1,3,5-Heptatriene 94.0774 95.0849 138
P51053 519.1231 520.1312 138
P00197 173.0305 174.0385 137

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G145900 hypothetical protein AT3G22425:IGPD:imidazoleglycerol-phosphate dehydratase__AT4G14910:HISN5B:HISTIDINE BIOSYNTHESIS 5B 0
Glyma.20G146000 hypothetical protein AT3G22430:AT3G22430:RNA recognition motif XS domain protein 0
Glyma.20G146100 hypothetical protein AT3G22440:AT3G22440:FRIGIDA-like protein 0
Glyma.20G146200 CG-BETA-1 beta-conglycinin beta-subunit NA 0
Glyma.20G146300 hypothetical protein NA 0
Glyma.20G146500 hypothetical protein NA 0
Glyma.20G146700 hypothetical protein NA 0
Glyma.20G146800 hypothetical protein AT3G22600:AT3G22600:Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein 0
Glyma.20G147000 hypothetical protein AT2G32040:AT2G32040:Major facilitator superfamily protein 0
Glyma.20G147200 hypothetical protein AT1G05440:AT1G05440:C-8 sterol isomerase 0