Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P54994 487.3446 488.3495 —
P55002 Ripromycin 524.2860 525.2964 —
P55003 Gaudichaudiic acid C 592.2313 593.2400 —
P55005 16S-methyl-sphing-4-enine 313.2955 314.3020 —
P55006 Leucyl-3-epi-deoxynegamycin 345.2398 346.2468 —
P55011 Dehydroabietal 284.2130 285.2200 —
P55012 9R-hydroxy-2E,4E-decadienoic acid 184.1098 185.1166 —
P55015 Chokol F 240.1764 241.1830 —
P55018 286.2237 287.2321 —
P55020 Rosmarinine-2-acetate 395.1928 396.1994 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G144500 hypothetical protein NA 0
Glyma.20G144600 hypothetical protein AT3G22400:LOX5:PLAT/LH2 domain-containing lipoxygenase family protein 0
Glyma.20G144700 hypothetical protein AT4G02770:PSAD-1:photosystem I subunit D-1 0
Glyma.20G144900 hypothetical protein NA 0
Glyma.20G145000 hypothetical protein NA 0
Glyma.20G145100 hypothetical protein NA 0
Glyma.20G145200 hypothetical protein NA 0
Glyma.20G145400 hypothetical protein AT4G14940:AO1:amine oxidase 1 0
Glyma.20G145600 hypothetical protein NA 0
Glyma.20G145700 hypothetical protein NA 0