Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P55217 Cryptophycin 52 668.2910 669.3012 —
P55219 Anadur 506.3390 507.3476 —
P55221 609.0220 610.0260 —
P55224 Hicksoane C 608.0116 609.0195 —
P55225 Haloxyline B 435.3725 436.3803 —
P55226 690.1733 691.1811 —
P55227 Pectenol A 582.4057 583.4119 —
P55228 609.6882 610.6931 —
P55232 609.7950 610.7988 —
P55233 667.3010 668.3098 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G143500 hypothetical protein AT5G19330:ARIA:ARM repeat protein interacting with ABF2 0
Glyma.20G143600 hypothetical protein AT3G05990:AT3G05990:Leucine-rich repeat (LRR) family protein 0
Glyma.20G143700 hypothetical protein AT3G05980:AT3G05980:uncharacterized protein 0
Glyma.20G143800 hypothetical protein NA 0
Glyma.20G143900 hypothetical protein AT3G05970:LACS6:long-chain acyl-CoA synthetase 6 0
Glyma.20G144000 hypothetical protein AT5G26330:AT5G26330:Cupredoxin superfamily protein 0
Glyma.20G144100 hypothetical protein NA 0
Glyma.20G144200 hypothetical protein NA 0
Glyma.20G144300 hypothetical protein NA 0
Glyma.20G144400 hypothetical protein AT3G22380:TIC:time for coffee 0