Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P09497 2,5-Dimethylfuran 96.0575 97.0642 193
P10553 299.1808 300.1868 193
P18019 AH 135Y 291.1104 292.1177 193
P29144 2-Hexyl-5-methyl-3(2H)-furanone 182.1294 183.1365 193
P37333 Xanthobaccin C 494.2826 495.2901 193
P40190 Tasumatrol F 632.2808 633.2882 193
P40307 Dolaconine 419.2601 420.2671 193
P00145 Limonenecarboxylic acid 180.1121 181.1181 192
P01028 Lamiridosin A 260.0890 261.0946 192
P03908 438.5879 439.5923 192

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G143500 hypothetical protein AT5G19330:ARIA:ARM repeat protein interacting with ABF2 0
Glyma.20G143600 hypothetical protein AT3G05990:AT3G05990:Leucine-rich repeat (LRR) family protein 0
Glyma.20G143700 hypothetical protein AT3G05980:AT3G05980:uncharacterized protein 0
Glyma.20G143800 hypothetical protein NA 0
Glyma.20G143900 hypothetical protein AT3G05970:LACS6:long-chain acyl-CoA synthetase 6 0
Glyma.20G144000 hypothetical protein AT5G26330:AT5G26330:Cupredoxin superfamily protein 0
Glyma.20G144100 hypothetical protein NA 0
Glyma.20G144200 hypothetical protein NA 0
Glyma.20G144300 hypothetical protein NA 0
Glyma.20G144400 hypothetical protein AT3G22380:TIC:time for coffee 0