Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P55021 Tetracenomycin C 472.1013 473.1074 —
P55022 SR 12813 504.2425 505.2504 —
P55026 8-[(2R,3S)-3-(8-Hydroxyoctyl)oxiran-2-yl]octanoylcarnitine 457.3382 458.3473 —
P55028 2,6-Diamino-9-(2-hydroxyethoxymethyl)purine 224.1034 225.1102 —
P55032 {4-[2-Acetylamino-2-(1-biphenyl-4-ylmethyl-2-oxo-azepan-3-ylcarbamoyl)-ethyl]-2-phosphono-phenoxy}-acetic acid 637.2216 638.2342 —
P55037 Commodore 449.0956 450.1062 —
P55043 Sumarotene 382.1962 383.2035 —
P55044 Phthalic anhydride 148.0148 149.0220 —
P55045 1'-Carboxy-chondrochloren A 571.2569 572.2623 —
P55046 Saligcinnamide 490.3909 491.3987 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G141300 hypothetical protein AT1G61770:AT1G61770:Chaperone DnaJ-domain superfamily protein 0
Glyma.20G141400 hypothetical protein NA 0
Glyma.20G141500 hypothetical protein NA 0
Glyma.20G141700 hypothetical protein AT1G61780:AT1G61780:postsynaptic protein-like protein 0
Glyma.20G141800 hypothetical protein AT1G11545:XTH8:xyloglucan endotransglucosylase/hydrolase 8 0
Glyma.20G141900 hypothetical protein AT1G61790:AT1G61790:Oligosaccharyltransferase complex/magnesium transporter family protein__AT1G11560:AT1G11560:Oligosaccharyltransferase complex/magnesium transporter family protein 0
Glyma.20G142000 hypothetical protein AT5G54770:THI1:thiazole biosynthetic enzyme, chloroplast (ARA6) (THI1) (THI4) 0
Glyma.20G142100 hypothetical protein NA 0
Glyma.20G142200 hypothetical protein NA 0
Glyma.20G142300 hypothetical protein NA 0