Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P55462 Schidigeragenin B 428.2908 429.2971 —
P55464 131.9595 132.9668 —
P55465 Medicagol 296.0316 297.0374 —
P55468 N-Desmethylzopiclone 374.0907 375.0977 —
P55469 Minwanensin 284.1634 285.1694 —
P55470 YM 47525 618.3033 619.3107 —
P55471 LysW-L-glutamyl 5-phosphate 356.0603 357.0673 —
P55474 Homoneoharringtonine 549.2443 550.2512 —
P55476 175.9825 176.9896 —
P55477 Ajugapantin A 550.2419 551.2490 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G140100 hypothetical protein NA 0
Glyma.20G140200 hypothetical protein AT4G23270:CRK19:cysteine-rich RLK (RECEPTOR-like protein kinase) 19__AT4G05200:CRK25:cysteine-rich RLK (RECEPTOR-like protein kinase) 25__AT4G23250:EMB1290:cysteine-rich receptor-like protein kinase 17 0
Glyma.20G140300 hypothetical protein NA 0
Glyma.20G140400 hypothetical protein AT4G05200:CRK25:cysteine-rich RLK (RECEPTOR-like protein kinase) 25 0
Glyma.20G140500 hypothetical protein NA 0
Glyma.20G140600 hypothetical protein NA 0
Glyma.20G140700 hypothetical protein NA 0
Glyma.20G140900 hypothetical protein AT4G05220:AT4G05220:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein family__AT1G61760:AT1G61760:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein family 0
Glyma.20G141000 hypothetical protein NA 0
Glyma.20G141100 hypothetical protein AT4G21210:RP1:PPDK regulatory protein 0