Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P31215 966.3363 967.3449 180
P37602 (6R)-9,10-Dihydroxy-4,7-megastigmadien-3-one-9-O-beta-D-glucopyranoside 386.1922 387.2002 180
P41095 423.3575 424.3622 180
P49211 Bamifylline 385.2106 386.2173 180
P06876 Lembyne A 342.0021 343.0076 179
P14986 N-(2-hydroxyhexadecanoyl)-sphinganine 555.5217 556.5296 179
P21946 999.3356 1000.3371 179
P23960 Upunaphenol N 934.2723 935.2842 179
P29027 Bazzanin J 492.0855 493.0949 179
P35945 475.1093 476.1172 179

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G140100 hypothetical protein NA 0
Glyma.20G140200 hypothetical protein AT4G23270:CRK19:cysteine-rich RLK (RECEPTOR-like protein kinase) 19__AT4G05200:CRK25:cysteine-rich RLK (RECEPTOR-like protein kinase) 25__AT4G23250:EMB1290:cysteine-rich receptor-like protein kinase 17 0
Glyma.20G140300 hypothetical protein NA 0
Glyma.20G140400 hypothetical protein AT4G05200:CRK25:cysteine-rich RLK (RECEPTOR-like protein kinase) 25 0
Glyma.20G140500 hypothetical protein NA 0
Glyma.20G140600 hypothetical protein NA 0
Glyma.20G140700 hypothetical protein NA 0
Glyma.20G140900 hypothetical protein AT4G05220:AT4G05220:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein family__AT1G61760:AT1G61760:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein family 0
Glyma.20G141000 hypothetical protein NA 0
Glyma.20G141100 hypothetical protein AT4G21210:RP1:PPDK regulatory protein 0