Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P55273 Cistanoside D 652.2406 653.2558 —
P55274 Clobenzorex 259.1142 260.1207 —
P55275 609.7594 610.7622 —
P55277 Tiegusanin I 570.2441 571.2512 —
P55281 607.8298 608.8337 —
P55282 Difluprednate 508.2267 509.2321 —
P55283 Aerobactin 564.2307 565.2395 —
P55284 Boletocrocin B 499.2284 500.2320 —
P55285 Nicotaxine 555.2530 556.2628 —
P55289 608.8615 609.8654 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G135000 hypothetical protein AT2G01270:QSOX2:quiescin-sulfhydryl oxidase 2 0
Glyma.20G135100 hypothetical protein NA 0
Glyma.20G135200 hypothetical protein NA 0
Glyma.20G135300 hypothetical protein AT1G49960:AT1G49960:Xanthine/uracil permease family protein 0
Glyma.20G135400 hypothetical protein NA 0
Glyma.20G135500 hypothetical protein NA 0
Glyma.20G135600 hypothetical protein AT1G50000:AT1G50000:methyltransferase 0
Glyma.20G135700 hypothetical protein NA 0
Glyma.20G136000 hypothetical protein AT1G50010:TUA2:tubulin alpha-2 chain 0
Glyma.20G136100 hypothetical protein AT1G50020:AT1G50020:tubulin alpha-6 chain 0