Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P45405 Tabun 162.0554 163.0611 139
P01361 Arctinol 264.0284 265.0373 138
P04584 2-Methylacetoacetic acid 116.0478 117.0546 138
P06382 eribaxaban 484.1280 485.1368 138
P10526 3,4,5-Trimethoxyphenyl acetate 226.0836 227.0894 138
P15136 799.3134 800.3211 138
P21419 Hemiphroside A 668.2311 669.2398 138
P26172 6'-Oxolividamine 305.1605 306.1677 138
P26977 Benzyl chloroacetate 184.0295 185.0374 138
P27453 6alpha,9alpha-Difluoroprednisolone-17-butyrate 466.2166 467.2245 138

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G131800 hypothetical protein NA 0
Glyma.20G131900 hypothetical protein NA 0
Glyma.20G132000 hypothetical protein AT4G33910:AT4G33910:2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein 0
Glyma.20G132100 hypothetical protein AT4G15090:FAR1:FRS (FAR1 Related Sequences) transcription factor family 0
Glyma.20G132200 hypothetical protein AT1G49870:AT1G49870:myosin-2 heavy chain-like protein 0
Glyma.20G132300 hypothetical protein AT2G23090:AT2G23090:Uncharacterized protein family SERF 0
Glyma.20G132400 hypothetical protein NA 0
Glyma.20G132500 hypothetical protein AT4G33905:AT4G33905:Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein 0
Glyma.20G132600 hypothetical protein AT4G33890:AT4G33890:transcriptional regulator of RNA polII, SAGA, subunit 0
Glyma.20G132700 hypothetical protein AT3G19570:SCO3:SNOWY COTYLEDON protein (DUF566)__AT1G49890:QWRF2:QWRF motif protein (DUF566) 0