Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P41898 546.7256 547.7355 141
P45366 Dechlorobarbamide 426.0934 427.1001 141
P48034 Halaminol B 199.1920 200.1999 141
P48323 1-Oleoylglycerophosphocholine 521.3420 522.3497 141
P54222 671.1509 672.1589 141
P05856 Midodrine 254.1227 255.1311 140
P07220 Polyanethole-sulfate 228.0448 229.0527 140
P07629 741.0583 742.0664 140
P10273 5-Imino-2-methyl-1-cyclopenten-1-ol 111.0682 112.0755 140
P20165 (+)-Cheimonophyllal 282.1437 283.1503 140

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G131800 hypothetical protein NA 0
Glyma.20G131900 hypothetical protein NA 0
Glyma.20G132000 hypothetical protein AT4G33910:AT4G33910:2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein 0
Glyma.20G132100 hypothetical protein AT4G15090:FAR1:FRS (FAR1 Related Sequences) transcription factor family 0
Glyma.20G132200 hypothetical protein AT1G49870:AT1G49870:myosin-2 heavy chain-like protein 0
Glyma.20G132300 hypothetical protein AT2G23090:AT2G23090:Uncharacterized protein family SERF 0
Glyma.20G132400 hypothetical protein NA 0
Glyma.20G132500 hypothetical protein AT4G33905:AT4G33905:Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein 0
Glyma.20G132600 hypothetical protein AT4G33890:AT4G33890:transcriptional regulator of RNA polII, SAGA, subunit 0
Glyma.20G132700 hypothetical protein AT3G19570:SCO3:SNOWY COTYLEDON protein (DUF566)__AT1G49890:QWRF2:QWRF motif protein (DUF566) 0