Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P28434 5,6-Epoxyoctadeca-7,9-diynoic acid 290.1834 291.1921 152
P36874 755.3385 756.3510 152
P42174 Verbesinoside E 1056.5399 1057.5471 152
P07213 Boc-L-cysteine 221.0741 222.0824 151
P12840 Isobutyl beta-D-glucopyranoside 236.1250 237.1317 151
P18633 Butanedioic acid, octenyl- 228.1353 229.1411 151
P20625 Lamiuside D 816.2663 817.2710 151
P26089 Kni 102 595.2949 596.3000 151
P31937 173.1467 174.1553 151
P43039 10-((1H-indol-3-ylcarbonyl)3,6-dideoxy-alpha-L-arabino-hexopyranosyloxy)-decanoic acid 461.2433 462.2502 151

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G131800 hypothetical protein NA 0
Glyma.20G131900 hypothetical protein NA 0
Glyma.20G132000 hypothetical protein AT4G33910:AT4G33910:2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein 0
Glyma.20G132100 hypothetical protein AT4G15090:FAR1:FRS (FAR1 Related Sequences) transcription factor family 0
Glyma.20G132200 hypothetical protein AT1G49870:AT1G49870:myosin-2 heavy chain-like protein 0
Glyma.20G132300 hypothetical protein AT2G23090:AT2G23090:Uncharacterized protein family SERF 0
Glyma.20G132400 hypothetical protein NA 0
Glyma.20G132500 hypothetical protein AT4G33905:AT4G33905:Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein 0
Glyma.20G132600 hypothetical protein AT4G33890:AT4G33890:transcriptional regulator of RNA polII, SAGA, subunit 0
Glyma.20G132700 hypothetical protein AT3G19570:SCO3:SNOWY COTYLEDON protein (DUF566)__AT1G49890:QWRF2:QWRF motif protein (DUF566) 0